Insertion junction: CLIP2.038422_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038422
Chromosome:chromosome 17
Location:3888252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727700 HEL65 (1 of 2) K16911 - ATP-dependent RNA helicase DDX21 [EC:3.6.4.13] (DDX21); DEAD box ATP-dependent RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCTCGCCCACGTTCCGCCCGCCTTCCTGCCCACCCCAACCCGAGGCC
Internal bar code:GAGTCTAACTGATTGAAGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3553
LEAP-Seq percent confirming:90.1235
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCGATATGGAGACCAGC
Suggested primer 2:CATCGCATGCAGCAATACCC