Insertion junction: CLIP2.038427_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038427
Chromosome:chromosome 6
Location:1040413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800615 (1 of 2) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGCGCCGCGCGGTGGGTGTGGTGGGCCTGGACGAGCCGCTGGCGCAC
Internal bar code:GATAGTAATTAAGCTGTTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3584
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCTCCTCCTCTCCTCCT
Suggested primer 2:GTGATGAACGGCCTGGACTC