Insertion junction: CLIP2.038431_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038431
Chromosome:chromosome 2
Location:4255316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104600 (1 of 1) PTHR24148:SF18 - ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCCGCCTCTCGGGCCTTGGCCAGCAGCTGCGCCAGCGCCGCACCTG
Internal bar code:TGTTGGGTGCCCCAGGCATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2421
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:CATAATCAAACGCTGCCCGG
Suggested primer 2:CCCAGATGTTGGCAGTAGCA