Insertion junction: CLIP2.038432_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038432
Chromosome:chromosome 3
Location:6443732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193250 (1 of 1) 2.7.1.160 - 2'-phosphotransferase / Yeast 2'-phosphotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCGGGGTGCCCGGCAAGGGTTTCGTGAGGCCACGGGTGGCGGAAGCT
Internal bar code:CGCGAGATAGATGAAACCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3705
LEAP-Seq percent confirming:90.3614
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAATTGGTAGAACGCTCG
Suggested primer 2:CACCTCGGCCCACTTGTTAT