Insertion junction: CLIP2.038443_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038443
Chromosome:chromosome 9
Location:5875977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411850 (1 of 2) PTHR23130:SF61 - DEFENSE PROTEIN L(2)34FC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCTTCATCCTCACGCCTAGGGCGCCGGCGCAAAGCCCTTCGAATTC
Internal bar code:TGAGAAAATTGGCTACTAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1886
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGACGGCTAGCCTCTCTTCA
Suggested primer 2:TCGTCCCAGCACCCCTAATA