Insertion junction: CLIP2.038447_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038447
Chromosome:chromosome 12
Location:4255057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518200 PDI1,DNJ3 (1 of 1) PTHR18929//PTHR18929:SF103//PTHR24078//PTHR24078:SF252 - PROTEIN DISULFIDE ISOMERASE // PROTEIN DISULFIDE-ISOMERASE A5 // DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED; Protein disulfide isomerase, DnaJ-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTGCGACAAAATAAGGCGCACAACCAGGAGTCCCGAGAGCGGGTTGCG
Internal bar code:GAGTATGTTAGATACGGTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1727
LEAP-Seq percent confirming:85.1852
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGCAACTTCGCTATCG
Suggested primer 2:GCATTTGGATTGGCGCCTAG