Insertion junction: CLIP2.038448_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038448
Chromosome:chromosome 16
Location:2122236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657850 SEC63 (1 of 1) K09540 - translocation protein SEC63 (SEC63, DNAJC23); ER-targeted preprotein translocase subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCCTGTGTCTGCCTGCCTGCCTGTGTGTATGTGTTGCGGCCGGCAG
Internal bar code:GTAGAAGTTTATGTGTTAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:788
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACAAACACACACGC
Suggested primer 2:TGTGTGTTTCCTCCTCTGCC