Insertion junction: CLIP2.038449_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038449
Chromosome:chromosome 2
Location:3295097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097550 (1 of 1) PTHR12532:SF0 - TRANSCRIPTIONAL REGULATORY PROTEIN HAH1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACCGCCATCAGGTTGCTGAGCCGGGCTCGGTGCTGTTCAACTTCCA
Internal bar code:AATTGAGAGCAGGTATCCCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:5724
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGCCACATACGTCTCCC
Suggested primer 2:GAAGGGACGGGAAGGGAAAG