Insertion junction: CLIP2.038449_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038449
Chromosome:chromosome 2
Location:3295198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097550 (1 of 1) PTHR12532:SF0 - TRANSCRIPTIONAL REGULATORY PROTEIN HAH1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGAGGCAGGCGTCGTCGGGTTCAGGTCAGAGGCGTAGTATGGTGTGG
Internal bar code:ACTGGTCAATGTCCGAAACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:591
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGGACGGGAAGGGAAAG
Suggested primer 2:CAGAGCCACATACGTCTCCC