Insertion junction: CLIP2.038451_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038451
Chromosome:chromosome 16
Location:7703145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686286 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCCACAGGTGCAGACCACGTCCCGCTCCTCTACCGCCCTGAGTGTCC
Internal bar code:TGTAAGGTTTTACGGAAATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1023
LEAP-Seq percent confirming:38.7097
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTACCTACGTATTGGC
Suggested primer 2:GCGTGTGTGGACAAGTGTTC