Insertion junction: CLIP2.038454_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038454
Chromosome:chromosome 13
Location:2059442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576800 PHX21,HIF1,HIF (1 of 1) K09592 - hypoxia-inducible factor prolyl hydroxylase (EGLN, HPH); Cytosolic prolyl 4-hydroxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCAGCGTGTAGGTCCGGGACTCCAGGGGTGTGAGGTGCAGCTGCCAG
Internal bar code:TGGTCTGGTGATGATACCCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGGGTTGGCAGTGGTTT
Suggested primer 2:GGGGATACTGGAATGCGAGG