Insertion junction: CLIP2.038460_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038460
Chromosome:chromosome 11
Location:2011686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467766 (1 of 1) 6.5.1.3 - RNA ligase (ATP) / Ribonucleic ligase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGCACTGTGTGGACGGCCAGCACAAGCGGCTGCTGGTGCACCGCAAG
Internal bar code:GAGGGATGTACGACGTCACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1358
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGTTCGGCGTAGATCCC
Suggested primer 2:CCTATCGCATTGCACTGCAC