Insertion junction: CLIP2.038461_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038461
Chromosome:chromosome 8
Location:3171602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre33.g758997 (1 of 1) PTHR22993//PTHR22993:SF18 - FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAAATGACGAGCCCCGTCACCGTTACGTTTACAGGGGTCTGAGCGAC
Internal bar code:CGGGACGGACCAGATATACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1266
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTCACAGCTCCGAGAGA
Suggested primer 2:TCGTGGCCTGTAGTCTAGCT