Insertion junction: CLIP2.038462_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038462
Chromosome:chromosome 9
Location:2054455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396451 GOX15 (1 of 1) IPR011043//IPR014756//IPR015202 - Galactose oxidase/kelch, beta-propeller // Immunoglobulin E-set // Domain of unknown function DUF1929; Glyoxal oxidase 15 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACGCGACCGGCGTATTGCTACACACGTACGTACGTCTGGCGGTTTCC
Internal bar code:ATCTCACCGGTTGGCTTCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:70.8333
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTCCCTTACTTTCCCCCG
Suggested primer 2:ATCCGTAAGTGGGTGGCAAG