Insertion junction: CLIP2.038474_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038474
Chromosome:chromosome 13
Location:1354891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571520 ANK12 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGGGATTGTGCTTGGACACGCACAGGACACACTCGTTGTGTGTGTCT
Internal bar code:CTAGGGCCTGTCAGGGGCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2689
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCGAACACCGCGAGATA
Suggested primer 2:TGCACACAACTCTCTCCGAC