Insertion junction: CLIP2.038477_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038477
Chromosome:chromosome 10
Location:366570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420450 (1 of 2) PTHR18841:SF0 - PROTEIN C08G5.3, ISOFORM A-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCCCGAACCCAAACTACCCTCGCATACCGGTCGATTCCCCAAGCGGC
Internal bar code:CTATATGTACCGGATCGCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:961
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCACTGCCGAGATAGCG
Suggested primer 2:ACAACACGGTGGTCAGATCC