Insertion junction: CLIP2.038478_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038478
Chromosome:chromosome 11
Location:3380199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477000 SNRK2D snRK1 family in Chlamydomonas, subgroup 2; (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAAGTAGTAATGAATGTACCCCCCCTCCCCACCCCACACACGCAGCG
Internal bar code:GAACTCTCCGTCTGGGTGCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:299
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAAAGAGCGAGGAGGAG
Suggested primer 2:GGCAGCTTTAGGGTTGGAGT