Insertion junction: CLIP2.038480_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038480
Chromosome:chromosome 17
Location:3569478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGGTGGAGGCGGCCGCCACGCCGCACACCTGTGCCTGTTGGGCCAG
Internal bar code:TCGGAGCAGCAGAGCTAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:453
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCAATGACGACTGTGTGA
Suggested primer 2:TCACGACTCACTTGACCAGC