Insertion junction: CLIP2.038480_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038480
Chromosome:chromosome 17
Location:3569478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCGTGCGGCGACGCGCGCAGGCAGCGCAGGCGGCGGCAGCGGCGGCG
Internal bar code:TCGGAGCAGCAGAGCTAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2464
LEAP-Seq percent confirming:90.6977
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGACTCACTTGACCAGC
Suggested primer 2:TCGCAATGACGACTGTGTGA