Insertion junction: CLIP2.038483_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038483
Chromosome:chromosome 2
Location:1090266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080550 PDE26 (1 of 1) PF00012//PF00233 - Hsp70 protein (HSP70) // 3'5'-cyclic nucleotide phosphodiesterase (PDEase_I); 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGAGCGAGTCAGGCGGCAACACAGAGCAGGGGGGAGAGGGGCACGGGC
Internal bar code:ATCACGCACACGAGTATTCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1688
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGATGTTCGGCCCTTACC
Suggested primer 2:CGCCATCCTCTGATCCTCAC