Insertion junction: CLIP2.038485_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038485
Chromosome:chromosome 2
Location:2749168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g093850 (1 of 1) IPR000104//IPR000595//IPR001611//IPR003591//IPR018490 - Antifreeze protein, type I // Cyclic nucleotide-binding domain // Leucine-rich repeat // Leucine-rich repeat, typical subtype // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCAGGTGCGTTGAAGCGTCTTGGTTGCGGTGGGGGCAGCTGTACAGT
Internal bar code:GTAGGCCAATGATAGGCGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4645
LEAP-Seq percent confirming:94.5205
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTATGCTTACGACGCCC
Suggested primer 2:CAAAGCGGGAGTCAAGGGAT