Insertion junction: CLIP2.038485_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038485
Chromosome:chromosome 2
Location:2749174
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g093850 (1 of 1) IPR000104//IPR000595//IPR001611//IPR003591//IPR018490 - Antifreeze protein, type I // Cyclic nucleotide-binding domain // Leucine-rich repeat // Leucine-rich repeat, typical subtype // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGTGGTGTGTCCGAGCCAGCGCCTGTGCCACGCTGTCCGCCACCAG
Internal bar code:GTAGGCCAATGATAGGCGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:532
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGCGGGAGTCAAGGGAT
Suggested primer 2:TCCTTATGCTTACGACGCCC