Insertion junction: CLIP2.038491_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038491
Chromosome:chromosome 1
Location:3316151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021400 SPL13 Pre-mRNA splicing factor; (1 of 1) PTHR16196//PTHR16196:SF0 - CELL CYCLE CONTROL PROTEIN CWF25 // PRE-MRNA-SPLICING FACTOR CWC25 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGACTCCTGCGTTTGGGAACTTGCGCTCACCTGCCTTGTCCTTCTAAC
Internal bar code:AGCGGAACTCAAGGGCGGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3330
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTTGCATGTTGCTGGG
Suggested primer 2:GTTGGCTGCTGTTGCTGTC