Insertion junction: CLIP2.038492_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038492
Chromosome:chromosome 9
Location:5508903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGAGCCGCCACGAAGGGGTGAGGTGGAGGCGCAGGAGCCGGAAGCTG
Internal bar code:TGTGCCTTCTGGGCTCATGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2668
LEAP-Seq percent confirming:86.9159
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCATACACGCGGCAGTG
Suggested primer 2:TGCGCTACCTTGTGATGGAG