Insertion junction: CLIP2.038493_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038493
Chromosome:chromosome 9
Location:2597420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392400 SEC24C (1 of 15) IPR011053 - Single hybrid motif; COP-II coat subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAAGCAAGACGCGAAAAGCCGGGTGTGAGGGGCCAAGGTCGGGGGAT
Internal bar code:TAATCTCCCGTCTACGTTAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2258
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGTCCTCACATCCCAC
Suggested primer 2:TCGCTCCCAATTCCATTGCT