Insertion junction: CLIP2.038496_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038496
Chromosome:chromosome 10
Location:4453324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g450700 CSB329,TNP26 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTACAACTGCGGGTGTCAGGAGATGGCCATCAAGCGGCTTGGGGGG
Internal bar code:GGGTTAATCTCAAAAAATCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5100
LEAP-Seq percent confirming:84.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGCCAAACGGTGAGACC
Suggested primer 2:GGGCCGATTCCATATGAGCA