Insertion junction: CLIP2.038498_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038498
Chromosome:chromosome 7
Location:1895299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325744 (1 of 1) PTHR19277//PTHR19277:SF102 - PENTRAXIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACACAACCGTCGCTTTGCTGCATCGCATACACTGTCTTTG
Internal bar code:AGTTCTGGGAGGGTGACCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TACACACGCCTTCCCCTTTC
Suggested primer 2:AGCAATCCGTTTGTGTGCAC