Insertion junction: CLIP2.038498_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038498
Chromosome:chromosome 7
Location:1895313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325744 (1 of 1) PTHR19277//PTHR19277:SF102 - PENTRAXIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGGTGGGCGTGGG
Internal bar code:TTGTAAAGATTTAGGTGTAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAATCCGTTTGTGTGCAC
Suggested primer 2:TACACACGCCTTCCCCTTTC