Insertion junction: CLIP2.038514_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038514
Chromosome:chromosome 6
Location:6342245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293051 AMT1C,AMT3 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCCATTGGAAGAAGAACACGTGCCAGCCCTGTGGGGGGGGCACGTGC
Internal bar code:AAATTTAAATTTGCGGCTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1192
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGAGAAGTGCGTGTACAA
Suggested primer 2:TCGTGCCTCTGGTTTCTCAC