Insertion junction: CLIP2.038516_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038516
Chromosome:chromosome 8
Location:833507
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361150 GT90F11,GT90-11 GT90 family protein 11; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAAGTGAGCGAGCGAGGCAGGGGGCAGAGGGCACTGGATATTGCGTT
Internal bar code:ATCAGAATTTGGAGAAATTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:208
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTCCACAACGTTGTTCG
Suggested primer 2:ACTAGTCATCCCTGGACCCC