Insertion junction: CLIP2.038521_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038521
Chromosome:chromosome 10
Location:5064661
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00035652

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTTGCGCATGCATGACCGGCACCGGGCGTGTAAGGCTGGCGACCGCG
Internal bar code:GATTTTATACTATAGGAAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2761
LEAP-Seq percent confirming:90.7407
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGCAAATGCTCGTGATG
Suggested primer 2:ATGTATGTTTGGAGGCGGCA