Insertion junction: CLIP2.038522_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038522
Chromosome:chromosome 7
Location:126750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313000 (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCACAATGATATGGCGAACGCACGCTTCTCGTTTCGTTGAACAAACAC
Internal bar code:TTAGTGCGGAGTTTTTCCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:678
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTTCGCATCAGCACATG
Suggested primer 2:GCCACTGCAGTTACCTCCAT