Insertion junction: CLIP2.038522_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038522
Chromosome:chromosome 7
Location:126750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313000 (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATGATTGGTAGGCATTCGCACAATCCGCCAAGGACCCACACCGCAAC
Internal bar code:TTATTACCTTCCCGGCGAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2055
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACTGCAGTTACCTCCAT
Suggested primer 2:CACCTTCGCATCAGCACATG