Insertion junction: CLIP2.038523_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038523
Chromosome:chromosome 13
Location:3368317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586650 FXL1 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATACATCAGTTGGCATCAGCACAGTGACGGCTCCGGGCGGCAGTCGGC
Internal bar code:AGTGTCCTAAAGAATATAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:6689
LEAP-Seq percent confirming:99.505
LEAP-Seq n confirming:201
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:202

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGGGGAGGTAGTCATCA
Suggested primer 2:GGATGGATGCTGGTACCGAG