Insertion junction: CLIP2.038530_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038530
Chromosome:chromosome 3
Location:3686985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g168650 (1 of 1) PF08621 - RPAP1-like, N-terminal (RPAP1_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATAATACCTGCTGCCGGAGCAGGTCATCCTCGGAGCCAAAGTCCAGGT
Internal bar code:GCCGTTTCTCCAGTAGGGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2392
LEAP-Seq percent confirming:97.4227
LEAP-Seq n confirming:189
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:194

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACGTGTGGAATGCAAAG
Suggested primer 2:AGGTCCTCCTCCGAATCCAA