Insertion junction: CLIP2.038530_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038530
Chromosome:chromosome 3
Location:3686988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g168650 (1 of 1) PF08621 - RPAP1-like, N-terminal (RPAP1_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGATCCCGCCGGCGCCGACTCCTTCCAAACGAGAGTTCACACATGAT
Internal bar code:GACGCTACTGTGGTCATTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2179
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCCTCCTCCGAATCCAA
Suggested primer 2:TGCACGTGTGGAATGCAAAG