Insertion junction: CLIP2.038536_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038536
Chromosome:chromosome 13
Location:1134453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569550 (1 of 17) PF08016 - Polycystin cation channel (PKD_channel) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAGGCGGTGCGCAGCTTGGCCACCTCAGCGGTGTCGCCGAGGGGCCC
Internal bar code:GACAGGCTTCTGCAAGGGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1580
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGAACAGCCAGAGCAG
Suggested primer 2:GCCACACACACAAGCTTGAG