Insertion junction: CLIP2.038538_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038538
Chromosome:chromosome 3
Location:4166380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800327 (1 of 3) 3.2.1.39 - Glucan endo-1,3-beta-D-glucosidase / Laminarinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGATCACATTTCTTGTTCCCTCCCGTCCCTCCCCTCCTGTGTGCCTCTC
Internal bar code:GCGTGGATACAAGGTGATGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2173
LEAP-Seq percent confirming:86.4865
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCAATGACTGCCCGTAC
Suggested primer 2:TATGCTTTCGACCTGCTGCA