Insertion junction: CLIP2.038544_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038544
Chromosome:chromosome 4
Location:583698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g800437 (1 of 2) IPR011043//IPR015915 - Galactose oxidase/kelch, beta-propeller // Kelch-type beta propeller intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCACCCCGCCCGTCCTCCTCCTCCACCACCAGCAGCCCCGCGCTGCC
Internal bar code:AGGGGTGTACGATGGTCAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:817
LEAP-Seq percent confirming:29.6296
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACGACTTCCTCAGGTTC
Suggested primer 2:CATCGGGTACATCTCTGGGC