Insertion junction: CLIP2.038546_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038546
Chromosome:chromosome 17
Location:2596251
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716400 (1 of 1) K14816 - pre-60S factor REI1 (REI1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGGCCTTACCACATGCTCGCGCCCAGATGCCCACCGTTTGCAACCCG
Internal bar code:GGATATCACCAAGGGTCGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCCAGCTGCAGTTCTCC
Suggested primer 2:CGGCTTCAAAGTTGTGGCTC