Insertion junction: CLIP2.038585_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038585
Chromosome:chromosome 13
Location:2962811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583750 (1 of 37) PF13639 - Ring finger domain (zf-RING_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTGTGTCAGCCTTGCTGCCGGTCAAAACCTATCACAGTCTCTTGCTA
Internal bar code:TGTGTACTCTGTGGCATGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2591
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCTAGTTGGAAGGCCA
Suggested primer 2:CACCACTCTTCACTCACCCC