Insertion junction: CLIP2.038594_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038594
Chromosome:chromosome 9
Location:5970436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412250 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGATTCCAGCAGCTGCATCGCCCCAGCCTCCATCGCAGCCCGGGGCA
Internal bar code:AGAATGTTGGACATTGAAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:271
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTCGTTTTCGTTGGTTT
Suggested primer 2:AAATACACGGGGCCTCACAG