Insertion junction: CLIP2.038594_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038594
Chromosome:chromosome 9
Location:5970448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412250 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTAGTCCCAGATCGTCCCCCACAATCGTCCCTCCACCTCGCACATCG
Internal bar code:AGAATGTTGGACATTGAAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:295
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AAATACACGGGGCCTCACAG
Suggested primer 2:CCGCTCGTTTTCGTTGGTTT