Insertion junction: CLIP2.038601_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038601
Chromosome:chromosome 3
Location:1115195
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148750 CLH1 Chlorophyllase I; (1 of 1) PTHR33428:SF2 - CHLOROPHYLLASE-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAGCGTGTTGTGGTGGTACGAGGTGTGATTCGAGGGAAGGTGTGACC
Internal bar code:TAGCCTGGAATTCCTCATTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3309
LEAP-Seq percent confirming:93.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGAAACCTGCGAACGAT
Suggested primer 2:GTGTACTGCACCACCGTGTA