Insertion junction: CLIP2.038607_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038607
Chromosome:chromosome 17
Location:3346849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722851 (1 of 6) 1.1.1.100 - 3-oxoacyl-[acyl-carrier-protein] reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCACTGCAAGCAAGCCCGAGTCCAGGTAAGGCGAGGCCGGAAACGACA
Internal bar code:ATTGTGTGATCATGTGATACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4249
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGGGGCAGGAATTGTTA
Suggested primer 2:GGCCATCTAGCTATGCTGCA