Insertion junction: CLIP2.038608_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038608
Chromosome:chromosome 1
Location:4315809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029350 C1d-87,FAP297 Flagellar central pair-associated protein 297; (1 of 1) IPR006885//IPR017986 - NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial // WD40-repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCAACCTGGTGTGGCAGCTGCAGCAGCGGCCGGACAAGAGCCCGCA
Internal bar code:TAGGTGGGAGCCACGTAGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1066
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACCACACTGCGACACAC
Suggested primer 2:GCACGAGGTGGACATCAAGA