Insertion junction: CLIP2.038609_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038609
Chromosome:chromosome 1
Location:1840348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010250 PPP2 (1 of 3) PTHR12320//PTHR12320:SF15 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAACAAGAGGCACGAGAATGCAAAGATGCGAAGATGGGGCGGGGAGT
Internal bar code:AATAGCTACTCGTGTTATGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:632
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGCATGTAACCCCACCC
Suggested primer 2:CATCCACTCTCACACCGCTT