Insertion junction: CLIP2.038611_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038611
Chromosome:chromosome 16
Location:6486598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674850 (1 of 1) PTHR14625//PTHR14625:SF3 - MICROCEPHALIN // MICROCEPHALIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGGGAGGGCAGCGGGGAAAGGGGGCGGGGCAGGAGGCGTGCATTCG
Internal bar code:ATTTTGAGTGACGTTTTTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1086
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCGCGATCTTCATGGAC
Suggested primer 2:TGGGTTCGGTTTGGTATGGG