Insertion junction: CLIP2.038618_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038618
Chromosome:chromosome 10
Location:1259065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801114 (1 of 2) IPR003072//IPR003882 - Orphan nuclear receptor, NOR1 type // Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGGGAAGAGACGCGATGGCCCTGTGCGCGCAGCAAGCATTGACGCCA
Internal bar code:CACTTCTGTCAAGAAATCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:278
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTCAGGAGAAGGAGGA
Suggested primer 2:TTGTCGAGGTCGTTTCTGGG