Insertion junction: CLIP2.038619_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038619
Chromosome:chromosome 2
Location:6544932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389100 GOT1 (1 of 3) PF04178 - Got1/Sft2-like family (Got1); Got1, COPII vesicle component intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGCAACTAACGCCTCTACCTGTGCTCCGCTCCTTTTACCTTGGATTG
Internal bar code:GATATCCCGTTATTATACTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:95
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCCTCGAAGCATACGGC
Suggested primer 2:CCATGTATGCGCCCCAAATG